Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is5/is1182 family transposase | RHPLAN_RS37095 | Not Available | Positive | 7979131 - 7980549 | 52319.4 |
| response regulator | RHPLAN_RS40970 | Not Available | Positive | 7980607 - 7981032 | 15220.3 |
| hypothetical protein | RHPLAN_RS40060 | Not Available | Negative | 7981070 - 7981222 | 5946.46 |
| hypothetical protein | RHPLAN_RS37100 | Not Available | Positive | 7981503 - 7981730 | 7962.51 |
| crp/fnr family transcriptional regulator | RHPLAN_RS37105 | Not Available | Negative | 7981779 - 7982504 | 26739.7 |
| efflux rnd transporter permease subunit | RHPLAN_RS37110 | Not Available | Negative | 7982685 - 7985855 | 113736.0 |
| efflux rnd transporter periplasmic adaptor subunit | RHPLAN_RS37115 | Not Available | Negative | 7985913 - 7987103 | 42727.2 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | RHPLAN_RS37120 | Not Available | Negative | 7987252 - 7989525 | 80681.3 |
| response regulator | RHPLAN_RS40880 | Not Available | Positive | 7989861 - 7992737 | 102813.0 |
| response regulator | RHPLAN_RS37130 | Not Available | Positive | 7992758 - 7993123 | 13134.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.