Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| low affinity iron permease family protein | RHPLAN_RS37045 | Not Available | Positive | 7967276 - 7967740 | 16739.0 |
| yqjd family protein | RHPLAN_RS37050 | Not Available | Negative | 7967764 - 7968120 | 12434.7 |
| hypothetical protein | RHPLAN_RS37055 | Not Available | Negative | 7968165 - 7968683 | 18647.1 |
| response regulator | RHPLAN_RS37060 | Not Available | Negative | 7968734 - 7969123 | 13696.5 |
| csbd family protein | RHPLAN_RS37065 | Not Available | Positive | 7969268 - 7969468 | 7868.19 |
| response regulator | RHPLAN_RS37070 | Not Available | Negative | 7969505 - 7970308 | 29014.9 |
| nepr family anti-sigma factor | RHPLAN_RS37075 | Not Available | Positive | 7970529 - 7970693 | 6352.71 |
| sigma-70 family rna polymerase sigma factor | RHPLAN_RS37080 | Not Available | Positive | 7970704 - 7971255 | 20409.1 |
| pas domain s-box protein | RHPLAN_RS37085 | Not Available | Positive | 7971442 - 7972449 | 36830.1 |
| hamp domain-containing protein | RHPLAN_RS37090 | Not Available | Positive | 7972925 - 7979113 | 222142.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.