Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS37000 | Not Available | Negative | 7955434 - 7956480 | 36480.8 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | RHPLAN_RS37005 | Not Available | Negative | 7956541 - 7958877 | 82504.3 |
| cupin domain-containing protein | RHPLAN_RS37010 | Not Available | Negative | 7958919 - 7959944 | 38091.0 |
| abc transporter substrate-binding protein | RHPLAN_RS37015 | Not Available | Negative | 7959986 - 7960912 | 32394.6 |
| abc transporter permease | RHPLAN_RS37020 | Not Available | Negative | 7960929 - 7961861 | 32002.0 |
| sugar abc transporter atp-binding protein | RHPLAN_RS37025 | Not Available | Negative | 7961864 - 7963333 | 52529.7 |
| hypothetical protein | RHPLAN_RS37030 | Not Available | Negative | 7963348 - 7964409 | 38888.6 |
| putative zinc-binding metallopeptidase | RHPLAN_RS37035 | Not Available | Negative | 7964427 - 7965581 | 43617.6 |
| duf3309 family protein | RHPLAN_RS38890 | Not Available | Positive | 7965754 - 7965909 | 5280.96 |
| ai-2e family transporter | RHPLAN_RS37040 | Not Available | Negative | 7965984 - 7967078 | 39508.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.