Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | RHPLAN_RS36950 | Not Available | Positive | 7943130 - 7944365 | 43654.6 |
| branched-chain amino acid abc transporter permease | RHPLAN_RS36955 | Not Available | Positive | 7944362 - 7945258 | 30965.1 |
| branched-chain amino acid abc transporter permease | RHPLAN_RS36960 | Not Available | Positive | 7945255 - 7946241 | 34129.5 |
| abc transporter atp-binding protein | RHPLAN_RS36965 | Not Available | Positive | 7946234 - 7947001 | 27076.1 |
| abc transporter atp-binding protein | RHPLAN_RS36970 | Not Available | Positive | 7946994 - 7947707 | 26067.8 |
| oxaloacetate decarboxylase | RHPLAN_RS36975 | Not Available | Positive | 7947710 - 7948615 | 32654.4 |
| hydantoinase b/oxoprolinase family protein | RHPLAN_RS36980 | Not Available | Positive | 7948612 - 7950345 | 61494.2 |
| hydantoinase/oxoprolinase family protein | RHPLAN_RS36985 | Not Available | Positive | 7950342 - 7952402 | 71731.7 |
| cysteine hydrolase | RHPLAN_RS36990 | Not Available | Positive | 7952399 - 7952995 | 21037.4 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | RHPLAN_RS36995 | Not Available | Negative | 7952977 - 7955307 | 83460.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.