Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1259 domain-containing protein | RHPLAN_RS36900 | Not Available | Negative | 7932646 - 7933530 | 30773.4 |
| chromate resistance protein chrb domain-containing protein | RHPLAN_RS36905 | Not Available | Negative | 7933626 - 7934420 | 29084.6 |
| cj0069 family protein | RHPLAN_RS36910 | Not Available | Negative | 7934557 - 7935594 | 38396.0 |
| mate family efflux transporter | RHPLAN_RS36915 | Not Available | Negative | 7935605 - 7937029 | 49150.0 |
| hypothetical protein | RHPLAN_RS36920 | Not Available | Negative | 7937167 - 7937931 | 27138.6 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS36925 | Not Available | Negative | 7937934 - 7938920 | 34602.3 |
| nad(p)/fad-dependent oxidoreductase | RHPLAN_RS36930 | Not Available | Negative | 7938980 - 7940179 | 44169.9 |
| 3-isopropylmalate dehydratase small subunit | RHPLAN_RS36935 | Not Available | Negative | 7940176 - 7940796 | 22784.1 |
| 3-isopropylmalate dehydratase large subunit | RHPLAN_RS36940 | Not Available | Negative | 7940804 - 7942216 | 49818.6 |
| gntr family transcriptional regulator | RHPLAN_RS36945 | Not Available | Positive | 7942306 - 7943133 | 30374.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.