Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter large permease | RHPLAN_RS36850 | Not Available | Positive | 7923780 - 7925060 | 44697.5 |
| trap transporter substrate-binding protein | RHPLAN_RS36855 | Not Available | Positive | 7925089 - 7926099 | 36269.0 |
| llm class flavin-dependent oxidoreductase | RHPLAN_RS36860 | Not Available | Positive | 7926152 - 7927210 | 40178.1 |
| hypothetical protein | RHPLAN_RS36865 | Not Available | Negative | 7927315 - 7927509 | 7188.88 |
| hypothetical protein | RHPLAN_RS36870 | Not Available | Negative | 7927533 - 7928294 | 27099.1 |
| ynce family protein | RHPLAN_RS36875 | Not Available | Negative | 7928307 - 7929326 | 36533.8 |
| hypothetical protein | RHPLAN_RS36880 | Not Available | Negative | 7929347 - 7929682 | 11981.2 |
| chromate efflux transporter | RHPLAN_RS36885 | Not Available | Negative | 7929719 - 7931125 | 49467.9 |
| superoxide dismutase | RHPLAN_RS36890 | Not Available | Negative | 7931263 - 7931859 | 21899.1 |
| hypothetical protein | RHPLAN_RS36895 | Not Available | Negative | 7932185 - 7932580 | 14143.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.