Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | RHPLAN_RS36755 | Not Available | Positive | 7901897 - 7902964 | 38919.2 |
| oligogalacturonate lyase family protein | RHPLAN_RS36760 | Not Available | Positive | 7903033 - 7904133 | 41371.4 |
| d-glutamate cyclase family protein | RHPLAN_RS36765 | Not Available | Positive | 7904189 - 7904965 | 27816.3 |
| hydantoinase/oxoprolinase family protein | RHPLAN_RS36770 | Not Available | Positive | 7905136 - 7907202 | 73895.6 |
| hydantoinase b/oxoprolinase family protein | RHPLAN_RS36775 | Not Available | Positive | 7907205 - 7909130 | 69810.0 |
| response regulator | RHPLAN_RS36780 | Not Available | Positive | 7909441 - 7910031 | 21617.9 |
| hypothetical protein | RHPLAN_RS36785 | Not Available | Positive | 7910037 - 7910576 | 20064.0 |
| hypothetical protein | RHPLAN_RS36790 | Not Available | Negative | 7910675 - 7911097 | 15167.1 |
| response regulator | RHPLAN_RS36795 | Not Available | Negative | 7911344 - 7911733 | 14082.5 |
| chemotaxis protein chea | RHPLAN_RS36800 | Not Available | Negative | 7911790 - 7914066 | 80628.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.