Rugositalea oryzae

Motileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rugositalea

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRugositalea
SpeciesRugositalea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAgricultural land
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoplanes sp. Z2-YC6860 chromosome, complete genome.

Gene Summary

Adenine Count

1494756 bp

Thymine Count

1493847 bp

Guanine Count

2602526 bp

Cytosine Count

2602760 bp

Genome Length

8193889 bp

Protein-coding Genes

7713 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
l,d-transpeptidaseRHPLAN_RS03630Not AvailablePositive792925 - 79392636368.5
sensor histidine kinaseRHPLAN_RS03635Not AvailablePositive794102 - 79603670432.9
response regulatorRHPLAN_RS03640Not AvailablePositive796068 - 79645113677.5
hypothetical proteinRHPLAN_RS03645Not AvailablePositive796451 - 79717325787.3
universal stress proteinRHPLAN_RS03650Not AvailableNegative797170 - 79799429421.2
nad(p)/fad-dependent oxidoreductaseRHPLAN_RS03655Not AvailableNegative798033 - 79937348114.6
uvrd-helicase domain-containing proteinRHPLAN_RS03660Not AvailableNegative799475 - 802558111602.0
bifunctional aminoglycoside phosphotransferase/atp-binding proteinRHPLAN_RS03665Not AvailableNegative802661 - 80419355799.6
hypothetical proteinRHPLAN_RS03670Not AvailableNegative804279 - 80478819094.1
ring-opening amidohydrolaseRHPLAN_RS03675Not AvailablePositive804809 - 80607444297.4

Displaying genes 741 – 750 of 7771 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.