Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarylacetoacetate hydrolase family protein | RHPLAN_RS36605 | Not Available | Negative | 7867809 - 7868774 | 35155.3 |
| voc family protein | RHPLAN_RS36610 | Not Available | Positive | 7868959 - 7869906 | 35199.6 |
| amidohydrolase family protein | RHPLAN_RS36615 | Not Available | Positive | 7870034 - 7870966 | 34188.4 |
| hypothetical protein | RHPLAN_RS36620 | Not Available | Negative | 7871045 - 7871329 | 10096.5 |
| hypothetical protein | RHPLAN_RS36625 | Not Available | Negative | 7871656 - 7872798 | 42021.3 |
| zinc-binding dehydrogenase | RHPLAN_RS36630 | Not Available | Negative | 7872807 - 7873826 | 35394.3 |
| ba14k family protein | RHPLAN_RS36635 | Not Available | Positive | 7874020 - 7874595 | 19068.7 |
| hypothetical protein | RHPLAN_RS36640 | Not Available | Negative | 7874599 - 7875648 | 38214.0 |
| nad-dependent malic enzyme | RHPLAN_RS36645 | Not Available | Negative | 7875672 - 7877372 | 61642.5 |
| polysaccharide deacetylase family protein | RHPLAN_RS36650 | Not Available | Positive | 7877503 - 7878357 | 31900.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.