Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i methionyl aminopeptidase | RHPLAN_RS36505 | Not Available | Positive | 7847484 - 7848308 | 30248.7 |
| radc family protein | RHPLAN_RS36510 | Not Available | Positive | 7848390 - 7849133 | 27289.9 |
| metallophosphoesterase | RHPLAN_RS36515 | Not Available | Positive | 7849233 - 7849973 | 27131.4 |
| bifunctional serine/threonine-protein kinase/universal stress protein | RHPLAN_RS36520 | Not Available | Positive | 7849991 - 7851406 | 51836.1 |
| rida family protein | RHPLAN_RS36525 | Not Available | Positive | 7851491 - 7851925 | 15511.8 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS36530 | Not Available | Negative | 7851932 - 7852900 | 33893.8 |
| tetr/acrr family transcriptional regulator | RHPLAN_RS36535 | Not Available | Negative | 7852991 - 7853665 | 25828.2 |
| coce/nond family hydrolase | RHPLAN_RS36540 | Not Available | Positive | 7853735 - 7855537 | 67584.5 |
| cobalamin-independent methionine synthase ii family protein | RHPLAN_RS36545 | Not Available | Negative | 7855790 - 7856929 | 42358.4 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS36550 | Not Available | Negative | 7856963 - 7857949 | 34807.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.