Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxaloacetate decarboxylase | RHPLAN_RS36455 | Not Available | Positive | 7838865 - 7839713 | 30046.3 |
| gnat family n-acetyltransferase | RHPLAN_RS36460 | Not Available | Positive | 7839704 - 7840384 | 25405.2 |
| d-erythronate dehydrogenase | RHPLAN_RS36465 | Not Available | Positive | 7840415 - 7841398 | 35348.8 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS36470 | Not Available | Positive | 7841419 - 7842387 | 33573.9 |
| dna/rna nuclease sfsa | RHPLAN_RS36475 | Not Available | Positive | 7842387 - 7843100 | 26008.5 |
| caib/baif coa-transferase family protein | RHPLAN_RS36480 | Not Available | Positive | 7843108 - 7844334 | 44061.6 |
| pirin family protein | RHPLAN_RS36485 | Not Available | Negative | 7844494 - 7845402 | 33391.7 |
| nadph-dependent fmn reductase | RHPLAN_RS36490 | Not Available | Negative | 7845480 - 7846049 | 20255.3 |
| helix-turn-helix domain-containing protein | RHPLAN_RS36495 | Not Available | Positive | 7846102 - 7846512 | 15050.3 |
| alpha/beta hydrolase | RHPLAN_RS36500 | Not Available | Positive | 7846509 - 7847414 | 33163.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.