Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | RHPLAN_RS36355 | Not Available | Negative | 7818008 - 7818700 | 24002.4 |
| trans-aconitate 2-methyltransferase | RHPLAN_RS36360 | Not Available | Positive | 7818945 - 7819643 | 24918.9 |
| molybdate abc transporter substrate-binding protein | RHPLAN_RS36365 | Not Available | Positive | 7819839 - 7820627 | 27857.8 |
| molybdate abc transporter substrate-binding protein | RHPLAN_RS36370 | Not Available | Positive | 7820680 - 7821477 | 27919.1 |
| molybdate abc transporter permease subunit | RHPLAN_RS36375 | Not Available | Positive | 7821653 - 7822345 | 24513.7 |
| molybdenum abc transporter atp-binding protein | RHPLAN_RS36380 | Not Available | Positive | 7822348 - 7823037 | 25410.1 |
| cobalamin-binding protein | RHPLAN_RS36385 | Not Available | Positive | 7823057 - 7823863 | 29018.1 |
| duf6580 family putative transport protein | RHPLAN_RS36390 | Not Available | Positive | 7823936 - 7824499 | 19733.6 |
| potassium/proton antiporter | RHPLAN_RS36395 | Not Available | Negative | 7824441 - 7826249 | 65100.9 |
| ybal family putative k(+) efflux transporter | RHPLAN_RS36400 | Not Available | Negative | 7826342 - 7828024 | 58303.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.