Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | RHPLAN_RS36255 | Not Available | Positive | 7796266 - 7797969 | 62402.9 |
| hpr kinase/phosphorylase | RHPLAN_RS36260 | Not Available | Positive | 7797977 - 7798417 | 15141.8 |
| pts sugar transporter subunit iia | RHPLAN_RS36265 | Not Available | Positive | 7798628 - 7799029 | 14175.4 |
| hpr family phosphocarrier protein | RHPLAN_RS36270 | Not Available | Positive | 7799041 - 7799358 | 10835.7 |
| udgx family uracil-dna binding protein | RHPLAN_RS36275 | Not Available | Negative | 7799496 - 7800131 | 22992.8 |
| adenosylhomocysteinase | RHPLAN_RS36280 | Not Available | Positive | 7800339 - 7801751 | 51543.2 |
| tetratricopeptide repeat protein | RHPLAN_RS36285 | Not Available | Positive | 7802035 - 7802763 | 26503.5 |
| glycosyltransferase family 39 protein | RHPLAN_RS36290 | Not Available | Negative | 7802805 - 7804331 | 55769.0 |
| lipo-like protein | RHPLAN_RS36295 | Not Available | Positive | 7804433 - 7805224 | 29658.1 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS36300 | Not Available | Positive | 7805243 - 7806262 | 36058.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.