Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhodanese-like domain-containing protein | RHPLAN_RS36205 | Not Available | Positive | 7784194 - 7784592 | 13812.4 |
| spy/cpxp family protein refolding chaperone | RHPLAN_RS36210 | Not Available | Positive | 7785072 - 7786907 | 68728.8 |
| hypothetical protein | RHPLAN_RS36215 | Not Available | Positive | 7787145 - 7787783 | 23100.8 |
| phosphoenolpyruvate carboxykinase | RHPLAN_RS36220 | Not Available | Negative | 7787876 - 7789495 | 59321.5 |
| pqq-dependent sugar dehydrogenase | RHPLAN_RS36225 | Not Available | Negative | 7789760 - 7790017 | 9499.34 |
| esterase | RHPLAN_RS36230 | Not Available | Negative | 7790104 - 7791126 | 37691.4 |
| esterase | RHPLAN_RS36235 | Not Available | Negative | 7791168 - 7792187 | 37417.0 |
| glycoside hydrolase family 15 protein | RHPLAN_RS36240 | Not Available | Negative | 7792286 - 7794133 | 68736.6 |
| hugz family protein | RHPLAN_RS36245 | Not Available | Negative | 7794372 - 7795094 | 26121.6 |
| response regulator transcription factor | RHPLAN_RS36250 | Not Available | Positive | 7795284 - 7795985 | 26572.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.