Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-glucose/gdp-mannose dehydrogenase family protein | RHPLAN_RS36150 | Not Available | Negative | 7771514 - 7772836 | 47766.4 |
| acyltransferase family protein | RHPLAN_RS36155 | Not Available | Positive | 7773156 - 7774184 | 38039.4 |
| dna polymerase i | RHPLAN_RS36160 | Not Available | Positive | 7774242 - 7777295 | 111480.0 |
| chemotaxis protein chew | RHPLAN_RS36170 | Not Available | Negative | 7777834 - 7778361 | 18837.7 |
| giy-yig nuclease family protein | RHPLAN_RS36175 | Not Available | Negative | 7778602 - 7778913 | 12379.2 |
| c-type cytochrome | RHPLAN_RS36180 | Not Available | Positive | 7779164 - 7780009 | 30081.9 |
| rida family protein | RHPLAN_RS36185 | Not Available | Negative | 7780018 - 7780515 | 17657.2 |
| slc13 family permease | RHPLAN_RS36190 | Not Available | Positive | 7780635 - 7781969 | 47784.9 |
| duf2865 domain-containing protein | RHPLAN_RS36195 | Not Available | Positive | 7782167 - 7782898 | 25730.1 |
| nad(p)/fad-dependent oxidoreductase | RHPLAN_RS36200 | Not Available | Negative | 7782888 - 7783985 | 38822.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.