Rugositalea oryzae

Motileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rugositalea

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRugositalea
SpeciesRugositalea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAgricultural land
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoplanes sp. Z2-YC6860 chromosome, complete genome.

Gene Summary

Adenine Count

1494756 bp

Thymine Count

1493847 bp

Guanine Count

2602526 bp

Cytosine Count

2602760 bp

Genome Length

8193889 bp

Protein-coding Genes

7713 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-n-acetylglucosamine 1-carboxyvinyltransferaseRHPLAN_RS03585Not AvailablePositive780646 - 78190844071.7
n-acetylglucosamine kinaseRHPLAN_RS03590Not AvailablePositive781905 - 78279530752.6
n-acetylmuramic acid 6-phosphate etheraseRHPLAN_RS03595Not AvailablePositive782803 - 78369630567.8
sis domain-containing proteinRHPLAN_RS03600Not AvailablePositive783689 - 78471435786.3
hypothetical proteinRHPLAN_RS38150Not AvailableNegative784775 - 78507410215.3
is5/is1182 family transposaseRHPLAN_RS40425Not AvailablePositive785600 - 78593211776.9
hypothetical proteinRHPLAN_RS03610Not AvailablePositive786423 - 7866267442.75
m10 family metallopeptidase c-terminal domain-containing proteinRHPLAN_RS40765Not AvailableNegative786675 - 790295120602.0
tetratricopeptide repeat proteinRHPLAN_RS38155Not AvailablePositive790416 - 79177148677.7
tetratricopeptide repeat proteinRHPLAN_RS03625Not AvailableNegative791797 - 79271432517.9

Displaying genes 731 – 740 of 7771 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.