Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| extracellular solute-binding protein | RHPLAN_RS36050 | Not Available | Negative | 7747750 - 7749624 | 69978.5 |
| extracellular solute-binding protein | RHPLAN_RS36055 | Not Available | Negative | 7749621 - 7751513 | 71249.1 |
| cytochrome c family protein | RHPLAN_RS36060 | Not Available | Negative | 7751703 - 7752284 | 20387.3 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | RHPLAN_RS36065 | Not Available | Positive | 7752452 - 7753189 | 26309.0 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS36070 | Not Available | Positive | 7753275 - 7754249 | 34663.8 |
| prephenate dehydratase | RHPLAN_RS36075 | Not Available | Positive | 7754259 - 7755110 | 30920.6 |
| amidohydrolase family protein | RHPLAN_RS36080 | Not Available | Positive | 7755134 - 7755982 | 30574.9 |
| alpha/beta fold hydrolase | RHPLAN_RS36085 | Not Available | Positive | 7755985 - 7756767 | 28804.9 |
| phosphomannomutase/phosphoglucomutase | RHPLAN_RS36090 | Not Available | Negative | 7756774 - 7758273 | 54861.0 |
| tigr02281 family clan aa aspartic protease | RHPLAN_RS36095 | Not Available | Negative | 7758385 - 7758915 | 19441.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.