Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalamin-independent methionine synthase ii family protein | RHPLAN_RS36000 | Not Available | Positive | 7737194 - 7738375 | 43516.5 |
| nlpc/p60 family protein | RHPLAN_RS36005 | Not Available | Positive | 7738380 - 7739219 | 29412.4 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS36010 | Not Available | Positive | 7739216 - 7740172 | 33206.4 |
| mmge/prpd family protein | RHPLAN_RS36015 | Not Available | Positive | 7740183 - 7741538 | 47310.0 |
| dsba family protein | RHPLAN_RS36020 | Not Available | Negative | 7741535 - 7742215 | 24253.5 |
| glyoxylate/hydroxypyruvate reductase a | RHPLAN_RS36025 | Not Available | Negative | 7742224 - 7743171 | 33840.9 |
| nudix domain-containing protein | RHPLAN_RS36030 | Not Available | Negative | 7743168 - 7743785 | 22401.9 |
| abc transporter atp-binding protein | RHPLAN_RS36035 | Not Available | Negative | 7743792 - 7745432 | 60386.3 |
| abc transporter permease | RHPLAN_RS36040 | Not Available | Negative | 7745438 - 7746574 | 42431.0 |
| microcin c abc transporter permease yejb | RHPLAN_RS36045 | Not Available | Negative | 7746631 - 7747734 | 40835.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.