Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flp pilus assembly protein cpab | RHPLAN_RS35950 | Not Available | Positive | 7726047 - 7726832 | 27443.7 |
| type ii and iii secretion system protein family protein | RHPLAN_RS35955 | Not Available | Positive | 7726853 - 7728307 | 51149.5 |
| cpad family pilus assembly protein | RHPLAN_RS35960 | Not Available | Positive | 7728330 - 7729073 | 26765.1 |
| aaa family atpase | RHPLAN_RS35965 | Not Available | Positive | 7729070 - 7730347 | 45659.8 |
| cpaf family protein | RHPLAN_RS35970 | Not Available | Positive | 7730388 - 7731899 | 54560.7 |
| type ii secretion system f family protein | RHPLAN_RS35975 | Not Available | Positive | 7731911 - 7732885 | 35525.3 |
| type ii secretion system f family protein | RHPLAN_RS35980 | Not Available | Positive | 7732895 - 7733911 | 37991.4 |
| tetratricopeptide repeat protein | RHPLAN_RS35985 | Not Available | Negative | 7733921 - 7734730 | 29157.2 |
| transporter substrate-binding domain-containing protein | RHPLAN_RS35990 | Not Available | Positive | 7734891 - 7735718 | 29837.7 |
| m17 family metallopeptidase | RHPLAN_RS35995 | Not Available | Positive | 7735750 - 7737135 | 49558.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.