Rugositalea oryzae

Motileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rugositalea

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRugositalea
SpeciesRugositalea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAgricultural land
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoplanes sp. Z2-YC6860 chromosome, complete genome.

Gene Summary

Adenine Count

1494756 bp

Thymine Count

1493847 bp

Guanine Count

2602526 bp

Cytosine Count

2602760 bp

Genome Length

8193889 bp

Protein-coding Genes

7713 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pqq-binding-like beta-propeller repeat proteinRHPLAN_RS35900Not AvailableNegative7715574 - 771733464632.1
tade/tadg family type iv pilus assembly proteinRHPLAN_RS35905Not AvailableNegative7717478 - 771805320330.6
tade/tadg family type iv pilus assembly proteinRHPLAN_RS35910Not AvailableNegative7718062 - 771856218011.8
pilus assembly protein n-terminal domain-containing proteinRHPLAN_RS35915Not AvailableNegative7718805 - 771924815313.7
flp family type ivb pilinRHPLAN_RS35920Not AvailablePositive7719748 - 77199155555.86
sugar-transfer associated atp-grasp domain-containing proteinRHPLAN_RS35925Not AvailablePositive7720155 - 772133643745.7
pyridoxal-dependent decarboxylaseRHPLAN_RS35930Not AvailableNegative7721311 - 772282854845.4
hypothetical proteinRHPLAN_RS40050Not AvailableNegative7722945 - 772388033869.7
flp family type ivb pilinRHPLAN_RS35940Not AvailablePositive7724962 - 77251536485.85
prepilin peptidaseRHPLAN_RS35945Not AvailablePositive7725298 - 772579817928.4

Displaying genes 7341 – 7350 of 7771 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.