Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(+) diphosphatase | RHPLAN_RS35855 | Not Available | Positive | 7707896 - 7708858 | 35173.6 |
| pfkb family carbohydrate kinase | RHPLAN_RS35860 | Not Available | Positive | 7708845 - 7709774 | 32304.1 |
| cupin domain-containing protein | RHPLAN_RS35865 | Not Available | Negative | 7709784 - 7710245 | 16707.6 |
| hypothetical protein | RHPLAN_RS40045 | Not Available | Negative | 7710251 - 7710409 | 5289.45 |
| yeee/yede family protein | RHPLAN_RS35870 | Not Available | Negative | 7710414 - 7711559 | 38698.0 |
| sulfurtransferase | RHPLAN_RS35875 | Not Available | Negative | 7711742 - 7712713 | 34099.4 |
| lrp/asnc family transcriptional regulator | RHPLAN_RS40335 | Not Available | Positive | 7712896 - 7713363 | 17102.8 |
| pentapeptide repeat-containing protein | RHPLAN_RS35885 | Not Available | Positive | 7713360 - 7714136 | 26286.6 |
| hypothetical protein | RHPLAN_RS35890 | Not Available | Negative | 7714144 - 7714887 | 27126.2 |
| cytochrome c | RHPLAN_RS35895 | Not Available | Positive | 7714937 - 7715479 | 19385.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.