Rugositalea oryzae

Motileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rugositalea

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRugositalea
SpeciesRugositalea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAgricultural land
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoplanes sp. Z2-YC6860 chromosome, complete genome.

Gene Summary

Adenine Count

1494756 bp

Thymine Count

1493847 bp

Guanine Count

2602526 bp

Cytosine Count

2602760 bp

Genome Length

8193889 bp

Protein-coding Genes

7713 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf1194 domain-containing proteinRHPLAN_RS35755Not AvailablePositive7691162 - 769186625198.3
mgtc/sapb family proteinRHPLAN_RS35760Not AvailablePositive7691878 - 769233915845.5
heme-binding proteinRHPLAN_RS35765Not AvailableNegative7692415 - 769290317679.4
duf1036 domain-containing proteinRHPLAN_RS35770Not AvailablePositive7692999 - 769403636766.4
pyrimidine 5'-nucleotidaseRHPLAN_RS35775Not AvailablePositive7694083 - 769478426953.1
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferaseRHPLAN_RS35780Not AvailablePositive7694848 - 769569029715.5
duf805 domain-containing proteinRHPLAN_RS35785Not AvailablePositive7695785 - 769625216449.6
succinyl-diaminopimelate desuccinylaseRHPLAN_RS35790Not AvailablePositive7696297 - 769746041591.5
trna pseudouridine(38-40) synthase truaRHPLAN_RS35795Not AvailableNegative7697633 - 769837027342.8
gnat family n-acetyltransferaseRHPLAN_RS35800Not AvailableNegative7698375 - 769887517932.7

Displaying genes 7311 – 7320 of 7771 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.