Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr01777 family oxidoreductase | RHPLAN_RS35705 | Not Available | Positive | 7681143 - 7682648 | 55061.8 |
| dmt family transporter | RHPLAN_RS35710 | Not Available | Positive | 7682685 - 7683569 | 31079.1 |
| fad-dependent monooxygenase | RHPLAN_RS35715 | Not Available | Positive | 7683578 - 7684735 | 42752.3 |
| alpha/beta fold hydrolase | RHPLAN_RS35720 | Not Available | Positive | 7684838 - 7685653 | 28792.6 |
| gfo/idh/moca family protein | RHPLAN_RS35725 | Not Available | Positive | 7685741 - 7686832 | 39372.1 |
| creatininase family protein | RHPLAN_RS35730 | Not Available | Positive | 7686822 - 7687625 | 29190.0 |
| cupin domain-containing protein | RHPLAN_RS35735 | Not Available | Positive | 7687636 - 7688010 | 13338.2 |
| d-isomer specific 2-hydroxyacid dehydrogenase family protein | RHPLAN_RS35740 | Not Available | Positive | 7688214 - 7689191 | 33781.9 |
| crp/fnr family transcriptional regulator | RHPLAN_RS35745 | Not Available | Negative | 7689201 - 7689932 | 26965.6 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS35750 | Not Available | Negative | 7690113 - 7691084 | 33865.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.