Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease p protein component | RHPLAN_RS35655 | Not Available | Positive | 7672146 - 7672544 | 14739.8 |
| membrane protein insertase yidc | RHPLAN_RS35660 | Not Available | Positive | 7672553 - 7674394 | 68418.0 |
| duf1993 family protein | RHPLAN_RS35665 | Not Available | Negative | 7674610 - 7675125 | 18787.7 |
| ribosome biogenesis gtp-binding protein yiha/ysxc | RHPLAN_RS35670 | Not Available | Positive | 7675181 - 7675843 | 23823.5 |
| duf423 domain-containing protein | RHPLAN_RS35675 | Not Available | Positive | 7676079 - 7676438 | 11685.8 |
| citrate synthase | RHPLAN_RS35680 | Not Available | Positive | 7676441 - 7677511 | 37534.1 |
| acetylglutamate kinase | RHPLAN_RS35685 | Not Available | Positive | 7677589 - 7678485 | 31429.3 |
| hypothetical protein | RHPLAN_RS35690 | Not Available | Positive | 7678553 - 7679554 | 35612.8 |
| gbsr/marr family transcriptional regulator | RHPLAN_RS35695 | Not Available | Positive | 7679828 - 7680403 | 21529.0 |
| duf4166 domain-containing protein | RHPLAN_RS35700 | Not Available | Positive | 7680445 - 7681143 | 25680.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.