Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RHPLAN_RS35525 | Not Available | Positive | 7643376 - 7643912 | 19683.1 |
| plp-dependent aspartate aminotransferase family protein | RHPLAN_RS35530 | Not Available | Positive | 7644009 - 7645163 | 40876.0 |
| tigr04282 family arsenosugar biosynthesis glycosyltransferase | RHPLAN_RS35535 | Not Available | Positive | 7645191 - 7645910 | 25353.2 |
| glycosyltransferase family 2 protein | RHPLAN_RS35540 | Not Available | Positive | 7645913 - 7646674 | 26902.8 |
| nad(p)-dependent oxidoreductase | RHPLAN_RS35545 | Not Available | Positive | 7646671 - 7647699 | 36282.2 |
| peroxiredoxin-like family protein | RHPLAN_RS35550 | Not Available | Positive | 7647855 - 7648550 | 25665.9 |
| duf2282 domain-containing protein | RHPLAN_RS35555 | Not Available | Positive | 7648669 - 7648953 | 9416.16 |
| duf692 family multinuclear iron-containing protein | RHPLAN_RS35560 | Not Available | Positive | 7649024 - 7649872 | 30945.8 |
| duf2063 domain-containing protein | RHPLAN_RS35565 | Not Available | Positive | 7649877 - 7650650 | 27970.2 |
| nad(p)/fad-dependent oxidoreductase | RHPLAN_RS35570 | Not Available | Positive | 7650818 - 7652140 | 47749.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.