Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RHPLAN_RS35475 | Not Available | Negative | 7633854 - 7634198 | 12336.0 |
| hypothetical protein | RHPLAN_RS35480 | Not Available | Negative | 7634723 - 7634962 | 8479.05 |
| nrsf family protein | RHPLAN_RS35485 | Not Available | Negative | 7635222 - 7635863 | 22637.3 |
| sigma-70 family rna polymerase sigma factor | RHPLAN_RS35490 | Not Available | Negative | 7635860 - 7636462 | 22198.9 |
| doxx family protein | RHPLAN_RS35495 | Not Available | Positive | 7636690 - 7637202 | 17810.4 |
| pas domain s-box protein | RHPLAN_RS35500 | Not Available | Positive | 7637426 - 7637824 | 14935.9 |
| site-specific integrase | RHPLAN_RS35505 | Not Available | Positive | 7638363 - 7639637 | 46282.7 |
| hypothetical protein | RHPLAN_RS35510 | Not Available | Positive | 7640135 - 7641763 | 58021.6 |
| molybdopterin-dependent oxidoreductase | RHPLAN_RS35515 | Not Available | Negative | 7641760 - 7642551 | 29640.4 |
| cytochrome b/b6 domain-containing protein | RHPLAN_RS35520 | Not Available | Negative | 7642564 - 7643241 | 25373.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.