Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | RHPLAN_RS35340 | Not Available | Negative | 7608519 - 7609184 | 24459.8 |
| nird/ygiw/ydei family stress tolerance protein | RHPLAN_RS35345 | Not Available | Positive | 7609314 - 7609901 | 20734.6 |
| hypothetical protein | RHPLAN_RS35350 | Not Available | Positive | 7609962 - 7610429 | 17392.8 |
| mfs transporter | RHPLAN_RS35355 | Not Available | Positive | 7610556 - 7611830 | 44193.5 |
| dmt family protein | RHPLAN_RS35360 | Not Available | Positive | 7611874 - 7612230 | 13392.6 |
| hsp70 family protein | RHPLAN_RS35365 | Not Available | Negative | 7612275 - 7613531 | 45269.3 |
| dead/deah box helicase | RHPLAN_RS35370 | Not Available | Negative | 7613571 - 7615544 | 72736.2 |
| hypothetical protein | RHPLAN_RS40020 | Not Available | Negative | 7615807 - 7615953 | 5253.52 |
| duf4336 domain-containing protein | RHPLAN_RS35375 | Not Available | Positive | 7616081 - 7616770 | 25728.2 |
| voc family protein | RHPLAN_RS35380 | Not Available | Positive | 7616786 - 7617175 | 14187.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.