Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar o-acetyltransferase | RHPLAN_RS35290 | Not Available | Negative | 7596087 - 7596656 | 20191.3 |
| duf2277 domain-containing protein | RHPLAN_RS35295 | Not Available | Negative | 7596822 - 7597106 | 10496.3 |
| alpha-ketoglutarate-dependent dioxygenase alkb | RHPLAN_RS35300 | Not Available | Positive | 7597244 - 7597819 | 21876.9 |
| glycosyltransferase family 1 protein | RHPLAN_RS35305 | Not Available | Negative | 7597850 - 7599259 | 51551.4 |
| orn/lys/arg decarboxylase n-terminal domain-containing protein | RHPLAN_RS35310 | Not Available | Positive | 7599438 - 7601795 | 88708.3 |
| gnat family n-acetyltransferase | RHPLAN_RS35315 | Not Available | Positive | 7601821 - 7602378 | 20737.9 |
| murr/rpir family transcriptional regulator | RHPLAN_RS35320 | Not Available | Negative | 7602418 - 7603260 | 30295.7 |
| phosphocholine-specific phospholipase c | RHPLAN_RS35325 | Not Available | Positive | 7603542 - 7605890 | 85627.5 |
| polysaccharide deacetylase | RHPLAN_RS35330 | Not Available | Positive | 7606133 - 7607083 | 34362.3 |
| hamp domain-containing sensor histidine kinase | RHPLAN_RS35335 | Not Available | Negative | 7607128 - 7608522 | 49738.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.