Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nudix domain-containing protein | RHPLAN_RS35200 | Not Available | Positive | 7579339 - 7579821 | 17718.1 |
| class ii aldolase/adducin family protein | RHPLAN_RS35205 | Not Available | Positive | 7579818 - 7580609 | 28493.7 |
| substrate-binding domain-containing protein | RHPLAN_RS35210 | Not Available | Negative | 7580628 - 7581428 | 27819.6 |
| hypothetical protein | RHPLAN_RS35215 | Not Available | Positive | 7581506 - 7581856 | 13311.8 |
| alpha/beta fold hydrolase | RHPLAN_RS35220 | Not Available | Positive | 7581881 - 7582684 | 29885.8 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS35225 | Not Available | Positive | 7582723 - 7583697 | 34114.3 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS35230 | Not Available | Negative | 7583705 - 7584691 | 34335.7 |
| flp family type ivb pilin | RHPLAN_RS35235 | Not Available | Negative | 7584868 - 7585029 | 5587.79 |
| hypothetical protein | RHPLAN_RS40015 | Not Available | Negative | 7585096 - 7585311 | 7854.22 |
| duf1236 domain-containing protein | RHPLAN_RS35240 | Not Available | Positive | 7585371 - 7586396 | 36664.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.