Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-coa hydratase/isomerase family protein | RHPLAN_RS35100 | Not Available | Positive | 7549971 - 7550708 | 26234.9 |
| llm class flavin-dependent oxidoreductase | RHPLAN_RS35105 | Not Available | Positive | 7550845 - 7552050 | 45607.3 |
| giy-yig nuclease family protein | RHPLAN_RS35110 | Not Available | Negative | 7552151 - 7552438 | 11364.6 |
| thiamine pyrophosphate-requiring protein | RHPLAN_RS35115 | Not Available | Positive | 7552615 - 7554360 | 62999.4 |
| substrate-binding domain-containing protein | RHPLAN_RS35120 | Not Available | Positive | 7554434 - 7555132 | 23991.2 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS35125 | Not Available | Positive | 7555244 - 7556212 | 33967.0 |
| duf2939 domain-containing protein | RHPLAN_RS35130 | Not Available | Positive | 7556333 - 7557625 | 47027.5 |
| llm class flavin-dependent oxidoreductase | RHPLAN_RS35135 | Not Available | Positive | 7557759 - 7558895 | 41869.7 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS35140 | Not Available | Positive | 7558964 - 7559947 | 35324.1 |
| hypothetical protein | RHPLAN_RS35145 | Not Available | Positive | 7560229 - 7566033 | 196913.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.