Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS35050 | Not Available | Positive | 7536477 - 7537499 | 36340.7 |
| ycii family protein | RHPLAN_RS35055 | Not Available | Positive | 7537768 - 7538187 | 15657.0 |
| rna polymerase sigma factor | RHPLAN_RS35060 | Not Available | Positive | 7538243 - 7539505 | 45688.0 |
| acyl-coa dehydrogenase family protein | RHPLAN_RS35065 | Not Available | Negative | 7539823 - 7541040 | 43309.8 |
| (2fe-2s)-binding protein | RHPLAN_RS35070 | Not Available | Negative | 7541116 - 7541691 | 20674.9 |
| ubid family decarboxylase | RHPLAN_RS35075 | Not Available | Negative | 7541899 - 7543368 | 53976.9 |
| duf3859 domain-containing protein | RHPLAN_RS35080 | Not Available | Negative | 7543563 - 7544078 | 19171.3 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | RHPLAN_RS35085 | Not Available | Negative | 7544104 - 7546422 | 83781.1 |
| xanthine dehydrogenase family protein subunit m | RHPLAN_RS35090 | Not Available | Negative | 7546419 - 7547294 | 31355.6 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | RHPLAN_RS35095 | Not Available | Positive | 7547493 - 7549844 | 84161.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.