Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter tctb family protein | RHPLAN_RS34950 | Not Available | Positive | 7515773 - 7516234 | 16340.0 |
| tripartite tricarboxylate transporter permease | RHPLAN_RS34955 | Not Available | Positive | 7516246 - 7517745 | 52472.9 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS34960 | Not Available | Positive | 7517805 - 7518815 | 36408.9 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS34965 | Not Available | Positive | 7518939 - 7519946 | 36050.3 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS34970 | Not Available | Positive | 7520089 - 7521096 | 36168.7 |
| metal-dependent phosphohydrolase | RHPLAN_RS34975 | Not Available | Positive | 7521186 - 7522031 | 31106.2 |
| hd domain-containing protein | RHPLAN_RS34980 | Not Available | Positive | 7522262 - 7523107 | 31190.4 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | RHPLAN_RS34985 | Not Available | Positive | 7523289 - 7525610 | 82468.9 |
| abc transporter substrate-binding protein | RHPLAN_RS34990 | Not Available | Negative | 7525808 - 7526881 | 37861.4 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS34995 | Not Available | Negative | 7526948 - 7527916 | 33711.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.