Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylated-dna--[protein]-cysteine s-methyltransferase | RHPLAN_RS34900 | Not Available | Negative | 7506265 - 7506861 | 21258.7 |
| prc-barrel domain-containing protein | RHPLAN_RS34905 | Not Available | Negative | 7506939 - 7507340 | 15197.9 |
| hypothetical protein | RHPLAN_RS34910 | Not Available | Negative | 7507490 - 7507723 | 7835.3 |
| hypothetical protein | RHPLAN_RS34915 | Not Available | Positive | 7507864 - 7508292 | 15226.7 |
| prc-barrel domain-containing protein | RHPLAN_RS34920 | Not Available | Positive | 7508384 - 7508908 | 17967.4 |
| atp-binding cassette domain-containing protein | RHPLAN_RS34925 | Not Available | Positive | 7509051 - 7510856 | 65823.4 |
| fad-dependent tricarballylate dehydrogenase tcua | RHPLAN_RS34930 | Not Available | Negative | 7511009 - 7512499 | 54176.4 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS34935 | Not Available | Positive | 7512726 - 7513703 | 33955.9 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS34940 | Not Available | Positive | 7513712 - 7514695 | 34495.5 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS34945 | Not Available | Positive | 7514759 - 7515730 | 34125.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.