Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iclr family transcriptional regulator | RHPLAN_RS34705 | Not Available | Negative | 7464231 - 7464968 | 25981.2 |
| sgnh/gdsl hydrolase family protein | RHPLAN_RS34710 | Not Available | Negative | 7465133 - 7465939 | 29153.0 |
| gdsl-type esterase/lipase family protein | RHPLAN_RS34715 | Not Available | Negative | 7465936 - 7466721 | 28538.3 |
| opgc domain-containing protein | RHPLAN_RS34720 | Not Available | Negative | 7466718 - 7467989 | 47458.6 |
| co2+/mg2+ efflux protein apag | RHPLAN_RS34725 | Not Available | Positive | 7468105 - 7468500 | 14623.2 |
| l,d-transpeptidase | RHPLAN_RS34730 | Not Available | Negative | 7468497 - 7469261 | 27141.6 |
| hsp33 family molecular chaperone | RHPLAN_RS34735 | Not Available | Negative | 7469258 - 7470286 | 36910.8 |
| ornithine carbamoyltransferase | RHPLAN_RS34740 | Not Available | Negative | 7470375 - 7471301 | 33964.9 |
| aspartate aminotransferase family protein | RHPLAN_RS34745 | Not Available | Negative | 7471298 - 7472506 | 42682.9 |
| gcra family cell cycle regulator | RHPLAN_RS34750 | Not Available | Positive | 7472906 - 7473406 | 18636.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.