Rugositalea oryzae

Motileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rugositalea

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRugositalea
SpeciesRugositalea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAgricultural land
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoplanes sp. Z2-YC6860 chromosome, complete genome.

Gene Summary

Adenine Count

1494756 bp

Thymine Count

1493847 bp

Guanine Count

2602526 bp

Cytosine Count

2602760 bp

Genome Length

8193889 bp

Protein-coding Genes

7713 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinRHPLAN_RS34605Not AvailableNegative7444287 - 74444816538.81
tigr03862 family flavoproteinRHPLAN_RS34610Not AvailableNegative7444557 - 744581043832.9
tripartite tricarboxylate transporter substrate-binding proteinRHPLAN_RS34615Not AvailableNegative7445926 - 744691234586.8
lysr family transcriptional regulatorRHPLAN_RS34620Not AvailablePositive7447049 - 744798134034.7
mfs transporterRHPLAN_RS34625Not AvailableNegative7447992 - 744926643861.1
llm class flavin-dependent oxidoreductaseRHPLAN_RS34630Not AvailableNegative7449392 - 745072048761.1
tripartite tricarboxylate transporter substrate binding proteinRHPLAN_RS34635Not AvailableNegative7450748 - 745171633430.4
duf3551 domain-containing proteinRHPLAN_RS34640Not AvailablePositive7452016 - 74522859232.91
hypothetical proteinRHPLAN_RS34645Not AvailableNegative7452369 - 74526178743.33
hypothetical proteinRHPLAN_RS34650Not AvailableNegative7452841 - 74530989308.14

Displaying genes 7071 – 7080 of 7771 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.