Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf6460 domain-containing protein | RHPLAN_RS34555 | Not Available | Positive | 7434434 - 7434706 | 10267.0 |
| mate family efflux transporter | RHPLAN_RS34560 | Not Available | Positive | 7434745 - 7436058 | 45939.2 |
| quinone-dependent dihydroorotate dehydrogenase | RHPLAN_RS34565 | Not Available | Negative | 7436059 - 7437153 | 38706.9 |
| helix-turn-helix transcriptional regulator | RHPLAN_RS34570 | Not Available | Positive | 7437285 - 7437923 | 22784.1 |
| tsup family transporter | RHPLAN_RS34575 | Not Available | Negative | 7437927 - 7438754 | 30327.9 |
| lysine--trna ligase | RHPLAN_RS34580 | Not Available | Negative | 7438810 - 7440441 | 61548.5 |
| sgnh/gdsl hydrolase family protein | RHPLAN_RS34585 | Not Available | Negative | 7440541 - 7441437 | 32139.8 |
| opgc family protein | RHPLAN_RS34590 | Not Available | Negative | 7441383 - 7442552 | 43745.0 |
| transporter substrate-binding domain-containing protein | RHPLAN_RS34595 | Not Available | Negative | 7442604 - 7443524 | 33953.6 |
| sco family protein | RHPLAN_RS34600 | Not Available | Negative | 7443669 - 7444283 | 22358.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.