Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pan domain-containing protein | RHPLAN_RS34405 | Not Available | Negative | 7399948 - 7400526 | 20721.8 |
| duf1127 domain-containing protein | RHPLAN_RS34410 | Not Available | Negative | 7400741 - 7401112 | 13655.6 |
| lysr substrate-binding domain-containing protein | RHPLAN_RS34415 | Not Available | Positive | 7401329 - 7402210 | 31999.3 |
| cys-trna(pro) deacylase | RHPLAN_RS34420 | Not Available | Negative | 7402392 - 7402865 | 16243.9 |
| glutamate--cysteine ligase | RHPLAN_RS34425 | Not Available | Negative | 7402878 - 7404242 | 51315.6 |
| marr family winged helix-turn-helix transcriptional regulator | RHPLAN_RS34430 | Not Available | Negative | 7404314 - 7404763 | 16635.2 |
| glutathione transferase gsta | RHPLAN_RS34435 | Not Available | Positive | 7404903 - 7405514 | 22161.9 |
| class i sam-dependent methyltransferase | RHPLAN_RS34440 | Not Available | Negative | 7405707 - 7406447 | 26870.2 |
| 3-hydroxyacyl-coa dehydrogenase nad-binding domain-containing protein | RHPLAN_RS34445 | Not Available | Negative | 7406483 - 7408696 | 79559.8 |
| cupin domain-containing protein | RHPLAN_RS34450 | Not Available | Negative | 7408702 - 7409166 | 17302.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.