Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme o synthase | RHPLAN_RS34355 | Not Available | Negative | 7388969 - 7389937 | 34358.9 |
| cytochrome c oxidase subunit i | RHPLAN_RS34360 | Not Available | Negative | 7389960 - 7391585 | 59305.9 |
| cytochrome c oxidase subunit ii | RHPLAN_RS34365 | Not Available | Negative | 7391657 - 7392496 | 31035.0 |
| invasion associated locus b family protein | RHPLAN_RS34370 | Not Available | Positive | 7392929 - 7393441 | 17984.2 |
| nad(p)-dependent oxidoreductase | RHPLAN_RS34375 | Not Available | Positive | 7393499 - 7394410 | 30938.0 |
| cupin domain-containing protein | RHPLAN_RS34380 | Not Available | Positive | 7394407 - 7394898 | 17561.8 |
| fumarylacetoacetate hydrolase family protein | RHPLAN_RS34385 | Not Available | Positive | 7394898 - 7395605 | 25021.2 |
| glycosyltransferase family 39 protein | RHPLAN_RS34390 | Not Available | Negative | 7395833 - 7397398 | 57476.1 |
| phosphatase pap2 family protein | RHPLAN_RS34395 | Not Available | Negative | 7397492 - 7398217 | 25953.9 |
| metalloprotease tldd | RHPLAN_RS34400 | Not Available | Positive | 7398349 - 7399767 | 50326.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.