Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal abc transporter substrate-binding protein | RHPLAN_RS34305 | Not Available | Negative | 7379744 - 7380652 | 32370.9 |
| acetamidase/formamidase family protein | RHPLAN_RS34310 | Not Available | Negative | 7380771 - 7382213 | 51952.5 |
| adenylate/guanylate cyclase domain-containing protein | RHPLAN_RS34315 | Not Available | Negative | 7382322 - 7384052 | 62715.6 |
| gnat family n-acetyltransferase | RHPLAN_RS34320 | Not Available | Negative | 7384198 - 7384779 | 21237.4 |
| mbl fold metallo-hydrolase | RHPLAN_RS34325 | Not Available | Negative | 7384898 - 7385863 | 34588.3 |
| surf1 family protein | RHPLAN_RS34330 | Not Available | Negative | 7385934 - 7386662 | 26720.0 |
| duf983 domain-containing protein | RHPLAN_RS34335 | Not Available | Negative | 7386794 - 7387189 | 14266.7 |
| cytochrome c oxidase subunit 3 | RHPLAN_RS34340 | Not Available | Negative | 7387260 - 7388132 | 32776.6 |
| cytochrome c oxidase assembly protein | RHPLAN_RS34345 | Not Available | Negative | 7388189 - 7388788 | 22102.4 |
| coxf protein | RHPLAN_RS34350 | Not Available | Negative | 7388796 - 7388972 | 6351.07 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.