Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2252 domain-containing protein | RHPLAN_RS34230 | Not Available | Negative | 7359563 - 7360972 | 52342.7 |
| duf4239 domain-containing protein | RHPLAN_RS34235 | Not Available | Positive | 7361108 - 7361887 | 27964.2 |
| is5/is1182 family transposase | RHPLAN_RS40700 | Not Available | Negative | 7362219 - 7362398 | 6109.5 |
| duf1254 domain-containing protein | RHPLAN_RS34240 | Not Available | Positive | 7362679 - 7364175 | 55508.2 |
| hlyd family secretion protein | RHPLAN_RS34245 | Not Available | Positive | 7364401 - 7365510 | 39808.1 |
| hypothetical protein | RHPLAN_RS39970 | Not Available | Positive | 7365548 - 7366327 | 28879.5 |
| hypothetical protein | RHPLAN_RS39980 | Not Available | Negative | 7367901 - 7368080 | 6448.79 |
| duf3309 family protein | RHPLAN_RS38860 | Not Available | Negative | 7368370 - 7368534 | 5394.14 |
| hypothetical protein | RHPLAN_RS39985 | Not Available | Negative | 7368534 - 7368674 | 5410.3 |
| hypothetical protein | RHPLAN_RS34255 | Not Available | Negative | 7368743 - 7369018 | 10046.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.