Rugositalea oryzae

Motileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rugositalea

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRugositalea
SpeciesRugositalea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAgricultural land
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoplanes sp. Z2-YC6860 chromosome, complete genome.

Gene Summary

Adenine Count

1494756 bp

Thymine Count

1493847 bp

Guanine Count

2602526 bp

Cytosine Count

2602760 bp

Genome Length

8193889 bp

Protein-coding Genes

7713 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sdr family nad(p)-dependent oxidoreductaseRHPLAN_RS03385Not AvailablePositive727425 - 72821627764.8
dihydroorotase family proteinRHPLAN_RS03390Not AvailablePositive728227 - 72966951874.3
abc transporter atp-binding proteinRHPLAN_RS03395Not AvailablePositive729666 - 73054132248.4
abc transporter permeaseRHPLAN_RS03400Not AvailablePositive730538 - 73131127706.7
abc transporter substrate-binding proteinRHPLAN_RS03405Not AvailablePositive731353 - 73238738115.5
amidohydrolase family proteinRHPLAN_RS03410Not AvailablePositive732446 - 73388852263.8
ring-opening amidohydrolaseRHPLAN_RS03415Not AvailablePositive733895 - 73499237876.2
duf983 domain-containing proteinRHPLAN_RS03420Not AvailableNegative735015 - 73542214769.3
plp-dependent aminotransferase family proteinRHPLAN_RS03425Not AvailablePositive735503 - 73687949571.0
xanthine dehydrogenase family protein molybdopterin-binding subunitRHPLAN_RS03430Not AvailableNegative736907 - 73913579093.0

Displaying genes 691 – 700 of 7771 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.