Rugositalea oryzae

Motileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rugositalea

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRugositalea
SpeciesRugositalea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAgricultural land
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoplanes sp. Z2-YC6860 chromosome, complete genome.

Gene Summary

Adenine Count

1494756 bp

Thymine Count

1493847 bp

Guanine Count

2602526 bp

Cytosine Count

2602760 bp

Genome Length

8193889 bp

Protein-coding Genes

7713 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cold-shock proteinRHPLAN_RS38050Not AvailableNegative68083 - 682867228.52
bon domain-containing proteinRHPLAN_RS00300Not AvailableNegative68372 - 6902223662.0
tripartite tricarboxylate transporter substrate binding proteinRHPLAN_RS00305Not AvailablePositive69156 - 7018435733.3
hypothetical proteinRHPLAN_RS38920Not AvailableNegative70186 - 7050011460.0
abc-f family atp-binding cassette domain-containing proteinRHPLAN_RS00310Not AvailablePositive70499 - 7212159764.3
fatty acid desaturaseRHPLAN_RS00315Not AvailablePositive72320 - 7322534651.6
hypothetical proteinRHPLAN_RS00320Not AvailableNegative73332 - 7405426804.2
glutamine synthetase family proteinRHPLAN_RS00325Not AvailableNegative74217 - 7571354567.3
aromatic ring-hydroxylating dioxygenase subunit alphaRHPLAN_RS00330Not AvailableNegative75727 - 7704349515.6
iclr family transcriptional regulator c-terminal domain-containing proteinRHPLAN_RS00335Not AvailablePositive77179 - 7797929176.6

Displaying genes 61 – 70 of 7771 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.