Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| f0f1 atp synthase subunit a | RHPLAN_RS34180 | Not Available | Positive | 7350587 - 7351336 | 26806.8 |
| f0f1 atp synthase subunit c | RHPLAN_RS34185 | Not Available | Positive | 7351404 - 7351631 | 7447.32 |
| atp synthase subunit b | RHPLAN_RS34190 | Not Available | Positive | 7351683 - 7352213 | 18822.6 |
| atp f0f1 synthase subunit b | RHPLAN_RS34195 | Not Available | Positive | 7352224 - 7352715 | 17888.3 |
| had family phosphatase | RHPLAN_RS34200 | Not Available | Positive | 7352957 - 7353613 | 22992.9 |
| hypothetical protein | RHPLAN_RS34205 | Not Available | Negative | 7353654 - 7354346 | 24452.3 |
| gnat family n-acetyltransferase | RHPLAN_RS34210 | Not Available | Negative | 7354500 - 7355087 | 22070.6 |
| pitrilysin family protein | RHPLAN_RS34215 | Not Available | Negative | 7355159 - 7356430 | 45533.2 |
| threonine synthase | RHPLAN_RS34220 | Not Available | Negative | 7356427 - 7357842 | 50549.5 |
| hypothetical protein | RHPLAN_RS34225 | Not Available | Negative | 7358811 - 7359482 | 24575.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.