Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is5/is1182 family transposase | RHPLAN_RS34130 | Not Available | Negative | 7336476 - 7336670 | 7214.11 |
| hybrid sensor histidine kinase/response regulator | RHPLAN_RS34135 | Not Available | Positive | 7337305 - 7340805 | 127819.0 |
| hybrid sensor histidine kinase/response regulator | RHPLAN_RS34140 | Not Available | Negative | 7340837 - 7343443 | 93755.2 |
| chemotaxis protein chew | RHPLAN_RS34145 | Not Available | Positive | 7344066 - 7344614 | 19316.5 |
| methyl-accepting chemotaxis protein | RHPLAN_RS34150 | Not Available | Positive | 7344637 - 7346634 | 70240.2 |
| eal domain-containing response regulator | RHPLAN_RS34155 | Not Available | Positive | 7346764 - 7348002 | 44658.6 |
| response regulator transcription factor | RHPLAN_RS34160 | Not Available | Negative | 7348016 - 7348690 | 24062.2 |
| secondary thiamine-phosphate synthase enzyme yjbq | RHPLAN_RS34165 | Not Available | Negative | 7348837 - 7349298 | 16732.2 |
| hypothetical protein | RHPLAN_RS34170 | Not Available | Negative | 7349301 - 7349843 | 19204.0 |
| atpz/atpi family protein | RHPLAN_RS34175 | Not Available | Positive | 7350183 - 7350542 | 12564.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.