Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine-type recombinase/integrase | RHPLAN_RS40695 | Not Available | Positive | 7306909 - 7307142 | 8183.98 |
| hypothetical protein | RHPLAN_RS34085 | Not Available | Positive | 7307391 - 7307735 | 12099.2 |
| tandem-95 repeat protein | RHPLAN_RS34090 | Not Available | Negative | 7307666 - 7327849 | 677722.0 |
| hypothetical protein | RHPLAN_RS34095 | Not Available | Positive | 7328364 - 7328636 | 10012.3 |
| alkaline phosphatase family protein | RHPLAN_RS34100 | Not Available | Negative | 7329168 - 7330847 | 58333.5 |
| mbl fold metallo-hydrolase | RHPLAN_RS34105 | Not Available | Positive | 7331080 - 7331979 | 32849.5 |
| tripartite tricarboxylate transporter substrate binding protein | RHPLAN_RS34110 | Not Available | Positive | 7332188 - 7333060 | 30378.7 |
| isochorismatase family protein | RHPLAN_RS34115 | Not Available | Negative | 7333072 - 7333782 | 26146.4 |
| 5-aminolevulinate synthase | RHPLAN_RS34120 | Not Available | Positive | 7334030 - 7335256 | 44147.0 |
| abrb family transcriptional regulator | RHPLAN_RS34125 | Not Available | Negative | 7335262 - 7336356 | 37220.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.