Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| low molecular weight phosphatase family protein | RHPLAN_RS34040 | Not Available | Negative | 7299934 - 7300401 | 17053.2 |
| upf0262 family protein | RHPLAN_RS34045 | Not Available | Negative | 7300405 - 7300887 | 18019.7 |
| histidinol dehydrogenase | RHPLAN_RS34050 | Not Available | Negative | 7300884 - 7302179 | 45260.2 |
| duf2948 family protein | RHPLAN_RS34055 | Not Available | Negative | 7302257 - 7302832 | 20885.0 |
| duf3574 domain-containing protein | RHPLAN_RS34060 | Not Available | Negative | 7302882 - 7303250 | 13631.4 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | RHPLAN_RS34065 | Not Available | Negative | 7303285 - 7304574 | 45222.5 |
| hypothetical protein | RHPLAN_RS34070 | Not Available | Negative | 7304603 - 7304809 | 7292.31 |
| signal peptidase i | RHPLAN_RS34075 | Not Available | Negative | 7304866 - 7305573 | 26188.4 |
| Trna-thr | Not Available | Not Available | Positive | 7305770 - 7305844 | Not Available |
| class i sam-dependent dna methyltransferase | RHPLAN_RS40330 | Not Available | Negative | 7306129 - 7306488 | 13392.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.