Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotidyltransferase | RHPLAN_RS38835 | Not Available | Positive | 7277707 - 7278465 | 27819.8 |
| duf6602 domain-containing protein | RHPLAN_RS33930 | Not Available | Positive | 7278462 - 7279178 | 26245.5 |
| hypothetical protein | RHPLAN_RS39955 | Not Available | Positive | 7279377 - 7279583 | 7570.33 |
| is5 family transposase | RHPLAN_RS38840 | Not Available | Negative | 7279872 - 7280633 | 28883.0 |
| glxa family transcriptional regulator | RHPLAN_RS33955 | Not Available | Negative | 7280926 - 7281873 | 34783.0 |
| hypothetical protein | RHPLAN_RS33960 | Not Available | Positive | 7282067 - 7282561 | 17904.8 |
| alpha/beta fold hydrolase | RHPLAN_RS33965 | Not Available | Positive | 7282875 - 7283747 | 32096.3 |
| hypothetical protein | RHPLAN_RS40690 | Not Available | Positive | 7283744 - 7284280 | 18851.2 |
| sos response-associated peptidase | RHPLAN_RS33975 | Not Available | Negative | 7284425 - 7285153 | 27202.6 |
| hypothetical protein | RHPLAN_RS33985 | Not Available | Positive | 7285548 - 7285892 | 12671.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.