Rugositalea oryzae

Motileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rugositalea

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRugositalea
SpeciesRugositalea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAgricultural land
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoplanes sp. Z2-YC6860 chromosome, complete genome.

Gene Summary

Adenine Count

1494756 bp

Thymine Count

1493847 bp

Guanine Count

2602526 bp

Cytosine Count

2602760 bp

Genome Length

8193889 bp

Protein-coding Genes

7713 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
response regulator transcription factorRHPLAN_RS33725Not AvailableNegative7231180 - 723155112953.5
response regulator transcription factorRHPLAN_RS33730Not AvailableNegative7231627 - 723228023984.3
is110 family transposaseRHPLAN_RS33740Not AvailableNegative7233070 - 723410437740.4
is5 family transposaseRHPLAN_RS38790Not AvailableNegative7234115 - 723492730773.3
nuclear transport factor 2 family proteinRHPLAN_RS33755Not AvailablePositive7235218 - 723573319100.8
alpha/beta fold hydrolaseRHPLAN_RS33760Not AvailablePositive7235862 - 723692038854.7
hamp domain-containing histidine kinaseRHPLAN_RS33765Not AvailableNegative7236977 - 723750719754.8
winged helix-turn-helix domain-containing proteinRHPLAN_RS33770Not AvailablePositive7237918 - 7240770104418.0
mase4 domain-containing proteinRHPLAN_RS33775Not AvailablePositive7241157 - 724274658357.8
duf1348 family proteinRHPLAN_RS38795Not AvailablePositive7242805 - 724326917901.3

Displaying genes 6891 – 6900 of 7771 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.