Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rugositalea
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rugositalea |
| Species | Rugositalea oryzae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Agricultural land |
| Biotic relationship | Not Available |
| Host(s) | Oryza sativa |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1494756 bp
Thymine Count
1493847 bp
Guanine Count
2602526 bp
Cytosine Count
2602760 bp
Genome Length
8193889 bp
Protein-coding Genes
7713 genes
Non-Coding Genes
58 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RHPLAN_RS33635 | Not Available | Negative | 7213718 - 7214269 | 20523.9 |
| abc transporter substrate-binding protein | RHPLAN_RS33640 | Not Available | Negative | 7214433 - 7215380 | 33769.8 |
| polysaccharide deacetylase family protein | RHPLAN_RS33645 | Not Available | Positive | 7215605 - 7216498 | 33833.7 |
| transcription elongation factor grea | RHPLAN_RS33650 | Not Available | Positive | 7216740 - 7217219 | 16832.8 |
| alpha/beta fold hydrolase | RHPLAN_RS33655 | Not Available | Positive | 7217542 - 7218462 | 34351.3 |
| hypothetical protein | RHPLAN_RS33660 | Not Available | Negative | 7218522 - 7218938 | 15214.3 |
| hypothetical protein | RHPLAN_RS39935 | Not Available | Negative | 7220417 - 7220584 | 6194.51 |
| hypothetical protein | RHPLAN_RS39940 | Not Available | Positive | 7220755 - 7220988 | 8322.43 |
| tripartite tricarboxylate transporter substrate-binding protein | RHPLAN_RS33665 | Not Available | Negative | 7221666 - 7222652 | 34823.8 |
| lysr family transcriptional regulator | RHPLAN_RS33670 | Not Available | Positive | 7222769 - 7223707 | 34132.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.