Rugositalea oryzae

Motileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rugositalea

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRugositalea
SpeciesRugositalea oryzae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatAgricultural land
Biotic relationshipNot Available
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoplanes sp. Z2-YC6860 chromosome, complete genome.

Gene Summary

Adenine Count

1494756 bp

Thymine Count

1493847 bp

Guanine Count

2602526 bp

Cytosine Count

2602760 bp

Genome Length

8193889 bp

Protein-coding Genes

7713 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
oxalurate catabolism protein hpxzRHPLAN_RS33535Not AvailablePositive7192948 - 719334914896.7
lipocalin-like domain-containing proteinRHPLAN_RS33540Not AvailablePositive7193346 - 719374414616.5
xanthine dehydrogenase family protein molybdopterin-binding subunitRHPLAN_RS33545Not AvailableNegative7193763 - 719604881468.6
(2fe-2s)-binding proteinRHPLAN_RS33550Not AvailableNegative7196045 - 719653017097.6
xanthine dehydrogenase family protein subunit mRHPLAN_RS33555Not AvailableNegative7196527 - 719731527477.8
amidohydrolase/deacetylase family metallohydrolaseRHPLAN_RS33560Not AvailablePositive7197488 - 719876545555.9
tripartite tricarboxylate transporter substrate binding proteinRHPLAN_RS33565Not AvailablePositive7198979 - 719997735088.5
tripartite tricarboxylate transporter substrate binding proteinRHPLAN_RS33570Not AvailableNegative7199984 - 720094934311.0
acetate--coa ligase family proteinRHPLAN_RS33575Not AvailableNegative7201015 - 720312073754.0
zn-ribbon domain-containing ob-fold proteinRHPLAN_RS33580Not AvailableNegative7203117 - 720355716750.2

Displaying genes 6851 – 6860 of 7771 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.